Programación de GPU en Java

Un poco de trasfondo

Ejecutar programas en la GPU

• DirectCompute: lenguaje / API de sombreador privado de Microsoft que forma parte de Direct3D, comenzando con DirectX 10.
• AMD FireStream: tecnologías privadas de ATI / Radeon que AMD está desactualizado.
• OpenACC: Consorcio de múltiples proveedores, solución de computación paralela
• ++ AMP: Microsoft C++
• CUDA: Nvidia,
• OpenL: , Apple, Khronos Group

GPGPU viene

1. Codificar datos como una matriz ráster.
2. Escribe sombreadores para manejarlos.
3. Envíelos a ambos a la tarjeta gráfica.
4. Obtener resultado del frame buffer
5. Decodificar datos de una matriz ráster.

OpenCL y Java

public class ArrayGPU {
    /**
     * The source code of the OpenCL program 
     */
    private static String programSource =
        "__kernel void "+
        "sampleKernel(__global const float *a,"+
        "             __global const float *b,"+
        "             __global float *c)"+
        "{"+
        "    int gid = get_global_id(0);"+
        "    c[gid] = a[gid] + b[gid];"+
        "}";
    
    public static void main(String args[])
    {
        int n = 10_000_000;
        float srcArrayA[] = new float[n];
        float srcArrayB[] = new float[n];
        float dstArray[] = new float[n];
        for (int i=0; i<n; i++)
        {
            srcArrayA[i] = i;
            srcArrayB[i] = i;
        }
        Pointer srcA = Pointer.to(srcArrayA);
        Pointer srcB = Pointer.to(srcArrayB);
        Pointer dst = Pointer.to(dstArray);


        // The platform, device type and device number
        // that will be used
        final int platformIndex = 0;
        final long deviceType = CL.CL_DEVICE_TYPE_ALL;
        final int deviceIndex = 0;

        // Enable exceptions and subsequently omit error checks in this sample
        CL.setExceptionsEnabled(true);

        // Obtain the number of platforms
        int numPlatformsArray[] = new int[1];
        CL.clGetPlatformIDs(0, null, numPlatformsArray);
        int numPlatforms = numPlatformsArray[0];

        // Obtain a platform ID
        cl_platform_id platforms[] = new cl_platform_id[numPlatforms];
        CL.clGetPlatformIDs(platforms.length, platforms, null);
        cl_platform_id platform = platforms[platformIndex];

        // Initialize the context properties
        cl_context_properties contextProperties = new cl_context_properties();
        contextProperties.addProperty(CL.CL_CONTEXT_PLATFORM, platform);
        
        // Obtain the number of devices for the platform
        int numDevicesArray[] = new int[1];
        CL.clGetDeviceIDs(platform, deviceType, 0, null, numDevicesArray);
        int numDevices = numDevicesArray[0];
        
        // Obtain a device ID 
        cl_device_id devices[] = new cl_device_id[numDevices];
        CL.clGetDeviceIDs(platform, deviceType, numDevices, devices, null);
        cl_device_id device = devices[deviceIndex];

        // Create a context for the selected device
        cl_context context = CL.clCreateContext(
            contextProperties, 1, new cl_device_id[]{device}, 
            null, null, null);
        
        // Create a command-queue for the selected device
        cl_command_queue commandQueue = 
            CL.clCreateCommandQueue(context, device, 0, null);

        // Allocate the memory objects for the input and output data
        cl_mem memObjects[] = new cl_mem[3];
        memObjects[0] = CL.clCreateBuffer(context,
            CL.CL_MEM_READ_ONLY | CL.CL_MEM_COPY_HOST_PTR,
            Sizeof.cl_float * n, srcA, null);
        memObjects[1] = CL.clCreateBuffer(context,
            CL.CL_MEM_READ_ONLY | CL.CL_MEM_COPY_HOST_PTR,
            Sizeof.cl_float * n, srcB, null);
        memObjects[2] = CL.clCreateBuffer(context,
            CL.CL_MEM_READ_WRITE,
            Sizeof.cl_float * n, null, null);
        
        // Create the program from the source code
        cl_program program = CL.clCreateProgramWithSource(context,
            1, new String[]{ programSource }, null, null);
        
        // Build the program
        CL.clBuildProgram(program, 0, null, null, null, null);
        
        // Create the kernel
        cl_kernel kernel = CL.clCreateKernel(program, "sampleKernel", null);
        
        // Set the arguments for the kernel
        CL.clSetKernelArg(kernel, 0,
            Sizeof.cl_mem, Pointer.to(memObjects[0]));
        CL.clSetKernelArg(kernel, 1,
            Sizeof.cl_mem, Pointer.to(memObjects[1]));
        CL.clSetKernelArg(kernel, 2,
            Sizeof.cl_mem, Pointer.to(memObjects[2]));
        
        // Set the work-item dimensions
        long global_work_size[] = new long[]{n};
        long local_work_size[] = new long[]{1};
        
        // Execute the kernel
        CL.clEnqueueNDRangeKernel(commandQueue, kernel, 1, null,
            global_work_size, local_work_size, 0, null, null);
        
        // Read the output data
        CL.clEnqueueReadBuffer(commandQueue, memObjects[2], CL.CL_TRUE, 0,
            n * Sizeof.cl_float, dst, 0, null, null);
        
        // Release kernel, program, and memory objects
        CL.clReleaseMemObject(memObjects[0]);
        CL.clReleaseMemObject(memObjects[1]);
        CL.clReleaseMemObject(memObjects[2]);
        CL.clReleaseKernel(kernel);
        CL.clReleaseProgram(program);
        CL.clReleaseCommandQueue(commandQueue);
        CL.clReleaseContext(context);

    }

    private static String getString(cl_device_id device, int paramName) {
        // Obtain the length of the string that will be queried
        long size[] = new long[1];
        CL.clGetDeviceInfo(device, paramName, 0, null, size);

        // Create a buffer of the appropriate size and fill it with the info
        byte buffer[] = new byte[(int)size[0]];
        CL.clGetDeviceInfo(device, paramName, buffer.length, Pointer.to(buffer), null);

        // Create a string from the buffer (excluding the trailing \0 byte)
        return new String(buffer, 0, buffer.length-1);
    }
}

__kernel void MatrixMul_kernel_basic(int dim,
                  __global float *A,
                  __global float *B,
                  __global float *C){

    int iCol = get_global_id(0);
    int iRow = get_global_id(1);
    float result = 0.0;
    for(int i=0; i< dim; ++i)
    {
          result +=
          A[iRow*dim + i]*B[i*dim + iCol];
    }
    C[iRow*dim + iCol] = result;
}

#define VECTOR_SIZE 4    
__kernel void MatrixMul_kernel_basic_vector4(
    size_t dim, // dimension is in single floats
    const float4 *A,
    const float4 *B,
    float4 *C)
{
    size_t globalIdx = get_global_id(0);
    size_t globalIdy = get_global_id(1);
    float4 resultVec = (float4){ 0, 0, 0, 0 };
    size_t dimVec = dim / 4;
    for(size_t i = 0; i < dimVec; ++i) {
        float4 Avector = A[dimVec * globalIdy + i];
        float4 Bvector[4];
        Bvector[0] = B[dimVec * (i * 4 + 0) + globalIdx];
        Bvector[1] = B[dimVec * (i * 4 + 1) + globalIdx];
        Bvector[2] = B[dimVec * (i * 4 + 2) + globalIdx];
        Bvector[3] = B[dimVec * (i * 4 + 3) + globalIdx];
        resultVec += Avector[0] * Bvector[0];
        resultVec += Avector[1] * Bvector[1];
        resultVec += Avector[2] * Bvector[2];
        resultVec += Avector[3] * Bvector[3];
    }

    C[dimVec * globalIdy + globalIdx] = resultVec;
}

CUDA y Java

• JCublas: todo para matrices
• JCufft: Transformada rápida de Fourier
• JCurand: todo para números aleatorios
• JCusparse: matrices raras
• JCusolver: factorización de números
• JNvgraph: todo para gráficos
• JCudpp: biblioteca CUDA de datos paralelos primitivos y algunos algoritmos de clasificación
• JNpp: procesamiento de imágenes GPU
• JCudnn: biblioteca de redes neuronales profundas

...
int n = 100;
curandGenerator generator = new curandGenerator();
float hostData[] = new float[n];
Pointer deviceData = new Pointer();
cudaMalloc(deviceData, n * Sizeof.FLOAT);
curandCreateGenerator(generator, CURAND_RNG_PSEUDO_DEFAULT); 
curandSetPseudoRandomGeneratorSeed(generator, 1234);
curandGenerateUniform(generator, deviceData, n);
cudaMemcpy(Pointer.to(hostData), deviceData, 
        n * Sizeof.FLOAT, cudaMemcpyDeviceToHost);
System.out.println(Arrays.toString(hostData));
curandDestroyGenerator(generator);
cudaFree(deviceData);
...

Manténgase por encima del código de bajo nivel

public static void main(String[] _args) {
    final int size = 512;
    final float[] a = new float[size];
    final float[] b = new float[size];

    /* fill the arrays with random values */
    for (int i = 0; i < size; i++){
        a[i] = (float) (Math.random() * 100);
        b[i] = (float) (Math.random() * 100);
    }
    final float[] sum = new float[size];

    Kernel kernel = new Kernel(){
        @Override public void run() {
I           int gid = getGlobalId();
            sum[gid] = a[gid] + b[gid];
        }
    };

    kernel.execute(Range.create(size));
    for(int i = 0; i < size; i++) {
        System.out.printf("%6.2f + %6.2f = %8.2f\n", a[i], b[i], sum[i])
    }
    kernel.dispose();
}

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